LPF: a framework for exploring the wing color pattern formation of ladybird beetles in Python

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Abstract

Biological pattern formation is one of the complex system phenomena in nature, requiring theoretical analysis based on mathematical modeling and computer simulations for in-depth understanding. We propose a Python framework named LPF to systematically explore the highly diverse wing color patterns of ladybirds using reaction-diffusion models. LPF supports GPU-accelerated array computing for numerical analysis of partial differential equation models, concise visualization of ladybird morphs, and evolutionary algorithms for searching mathematical models with deep learning models for computer vision.

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Lee, D. (2023). LPF: a framework for exploring the wing color pattern formation of ladybird beetles in Python. Bioinformatics, 39(7). https://doi.org/10.1093/bioinformatics/btad430

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