FHIR Genomics: enabling standardization for precision medicine use cases

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Abstract

The development of Fast Healthcare Interoperability Resources (FHIR) Genomics, a feasible and efficient method for exchanging complex clinical genomic data and interpretations, is described. FHIR Genomics is a subset of the emerging Health Level 7 FHIR standard and targets data from increasingly available technologies such as next-generation sequencing. Much care and integration of feedback have been taken to ease implementation, facilitate wide-scale interoperability, and enable modern app development toward a complete precision medicine standard. A new use case, the integration of the Variant Interpretation for Cancer Consortium (VICC) “meta-knowledgebase” into a third-party application, is described.

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Alterovitz, G., Heale, B., Jones, J., Kreda, D., Lin, F., Liu, L., … Warner, J. L. (2020). FHIR Genomics: enabling standardization for precision medicine use cases. Npj Genomic Medicine, 5(1). https://doi.org/10.1038/s41525-020-0115-6

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