Tritium labeling of antisense oligonucleotides by exchange with tritiated water

Abstract

We describe a simple, efficient, procedure for labeling oligonucleotides to high specific activity (> 1×108 cpm/μmol) by hydrogen exchange with tritlated water at the C8 positions of purines in the presence of β-mercaptoethanol, an effective radical scavenger. Approximately 90% of the starting material is recovered as intact, labeled oligonucleotide. The radiolabeled compounds are stable in biological systems; greater than 90% of the specific activity is retained after 72 hr incubation at 37°C in serum-containing media. Data obtained from in vitro cellular uptake experiments using oligonucleotides labeled by this method are similar to those obtained using 35S or 14C-labeled compounds. Because this protocol is solely dependent upon the existence of purine residues, it should be useful for radiolabeling modified as well as unmodified phosphodlester oligonucleotides. © 1993 Oxford University Press.