Toxins from Venomous Animals: Gene Cloning, Protein Expression and Biotechnological Applications

  • F. M
  • Flix-Silva J
  • A. Y
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Abstract

The development and application of computational methods for studying molecular crystals, particularly density-functional theory (DFT), is a large and ever-growing field, driven by their numerous applications. Here we expand on our recent study of the importance of many-body van der Waals interactions in molecular crystals [A. M. Reilly and A. Tkatchenko, J. Phys. Chem. Lett.4, 1028 (Year: 2013)10.1021/jz400226x], with a larger database of 23 molecular crystals. Particular attention has been paid to the role of the vibrational contributions that are required to compare experiment sublimation enthalpies with calculated lattice energies, employing both phonon calculations and experimental heat-capacity data to provide harmonic and anharmonic estimates of the vibrational contributions. Exact exchange, which is rarely considered in DFT studies of molecular crystals, is shown to have a significant contribution to lattice energies, systematically improving agreement between theory and experiment. When the vibrational and exact-exchange contributions are coupled with a many-body approach to dispersion, DFT yields a mean absolute error (3.92 kJ/mol) within the coveted ``chemical accuracy'' target (4.2 kJ/mol). The role of many-body dispersion for structures has also been investigated for a subset of the database, showing good performance compared to X-ray and neutron diffraction crystal structures. The results show that the approach employed here can reach the demanding accuracy of crystal-structure prediction and organic material design with minimal empiricism.

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F., M., Flix-Silva, J., & A., Y. (2013). Toxins from Venomous Animals: Gene Cloning, Protein Expression and Biotechnological Applications. In An Integrated View of the Molecular Recognition and Toxinology - From Analytical Procedures to Biomedical Applications. InTech. https://doi.org/10.5772/52380

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