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Shufflet: Shuffling sequences while conserving the k-let counts

Bioinformatics
DOI: 10.1093/bioinformatics/15.12.1058
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Abstract

Shufflet is a program and a web-application that generates fast random shufflings of sequences (DNA, protein or others), conserving the exact k-let counts for a given k. The sequences are sampled uniformly from all the valid permutations. Availability: As a web application: http://www.genetique.uvsq.fr/eivind/shufflet.html. Source code is available on request for academic use.

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APA

Coward, E. (1999). Shufflet: Shuffling sequences while conserving the k-let counts. Bioinformatics. Oxford University Press. https://doi.org/10.1093/bioinformatics/15.12.1058

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