NetSeed: A network-based reverse-ecology tool for calculating the metabolic interface of an organism with its environment

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Abstract

Summary: NetSeed is a web tool and Perl module for analyzing the topology of metabolic networks and calculating the set of exogenously acquired compounds. NetSeed is based on the seed detection algorithm, developed and validated in previous studies. © The Author 2012. Published by Oxford University Press. All rights reserved.

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Carr, R., & Borenstein, E. (2012). NetSeed: A network-based reverse-ecology tool for calculating the metabolic interface of an organism with its environment. Bioinformatics, 28(5), 734–735. https://doi.org/10.1093/bioinformatics/btr721

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