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OntoCAT - an integrated programming toolkit for common ontology application tasks

  • Adamusiak T
  • Kurbatova N
  • Swertz M
  • et al.
Nature Precedings (2011)
DOI: 10.1038/npre.2011.6121.1
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Abstract

OntoCAT provides high level abstraction for interacting with ontology resources including local ontology files in standard OWL and OBO formats (via OWL API) and public ontology repositories: EBI Ontology Lookup Service (OLS) and NCBO BioPortal. Each resource is wrapped behind easy to learn Java, Bioconductor/R and REST web service commands enabling reuse and integration of ontology software efforts despite variation in technologies.

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Adamusiak, T., Kurbatova, N., Swertz, M., & Parkinson, H. (2011). OntoCAT - an integrated programming toolkit for common ontology application tasks. Nature Precedings. https://doi.org/10.1038/npre.2011.6121.1

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