The catalytic role of aspartate in the active site of glutamate dehydrogenase

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Abstract

A putative catalytic aspartyl residue, Asp-165, in the active site of clostridial glutamate dehydrogenase has been replaced with serine by site-directed mutagenesis. The mutant enzyme is efficiently overexpressed in Escherichia coli as a soluble protein and can be successfully purified by the dye-ligand chromatographic procedure normally employed for the wild-type enzyme. By several criteria, including circular dichroism spectrum, sulphydryl reactivity with Ellman's reagent, crystallization and mobility in non-denaturing electrophoresis, the enzyme appears to be correctly folded. NAD+ protects the D165S mutant against modification by Ellman's reagent, suggesting unimpaired binding of coenzyme. In standard assays the specific activity is decreased 103-fold in the reductive amination reaction and 105-fold for oxidative deamination. Kinetic studies show that apparent K(m) values for NADH and 2-oxoglutarate are almost unchanged. The large reduction in the reaction rate coincides with a weakening of the affinity for ammonium ion (K(m) > 300 mM, compared with 60 mM for the wild-type). The data are entirely consistent with the direct involvement of D165 in catalysis rather than in the binding of coenzyme or 2-oxoglutarate.

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Dean, J. L. E., Wang, X. G., Teller, J. K., Waugh, M. L., Britton, K. L., Baker, P. J., … Engel, P. C. (1994). The catalytic role of aspartate in the active site of glutamate dehydrogenase. Biochemical Journal, 301(1), 13–16. https://doi.org/10.1042/bj3010013

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