Probing the anomeric effect and mechanism of isomerization of oxazinane rings by DFT methods

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Abstract

Mechanistic studies of the thermal amine-promoted isomerization of oxazinane rings by DFT methods showed that the isomerization proceeds through abstraction of the C-3 hydrogen atom by the amine nitrogen atom followed by its re-recruitment from C-3 that helps the oxazinane ring to avoid breaking, leading to the same or an isomeric conformer. Calculations also provided evidence that steric effects are responsible for the breaking of the O-N bond in the transition state of the thermal amine-promoted transformations of oxazinane rings, leading to the transformation of the 6-membered ring to a 5-membered ring. Extensive computational studies of the origin of the anomeric effect in the di-substituted oxazinane rings, bearing the EtO substituent at C-6 and CO2Et at C-3, and a series of analogous tetrahydro-2H-pyran ring conformers, revealed that the conformational preferences in both series of compounds are tuned by the balance of non-covalent (weak vDW, dipole-dipole, electrostatic forces, hydrogen bonding) steric effects and hyperconjugative interactions.

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Tsipis, C. A., Bakalbassis, E. G., Zisopoulou, S. A., & Gallos, J. K. (2021). Probing the anomeric effect and mechanism of isomerization of oxazinane rings by DFT methods. Organic and Biomolecular Chemistry, 19(5), 1066–1082. https://doi.org/10.1039/d0ob02453h

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