Convex hull as diagnostic tool in single-molecule localization microscopy

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Abstract

Motivation: Single-molecule localization microscopy resolves individual fluorophores or fluorescence-labeled biomolecules. Data are provided as a set of localizations that distribute normally around the true fluorophore position with a variance determined by the localization precision. Characterizing the spatial fluorophore distribution to differentiate between resolution-limited localization clusters, which resemble individual biomolecules, and extended structures, which represent aggregated molecular complexes, is a common challenge. Results: We demonstrate the use of the convex hull and related hull properties of localization clusters for diagnostic purposes, as a parameter for cluster selection or as a tool to determine localization precision.

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Ebert, V., Eiring, P., Helmerich, D. A., Seifert, R., Sauer, M., & Doose, S. (2022). Convex hull as diagnostic tool in single-molecule localization microscopy. Bioinformatics, 38(24), 5421–5429. https://doi.org/10.1093/bioinformatics/btac700

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