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Redi: A simulator of stochastic biochemical reaction-diffusion systems

Proceedings - 2nd International Conference on Advances in System Simulation, SIMUL 2010 (2010) 82-87
DOI: 10.1109/SIMUL.2010.14
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Abstract

We present a new model of anisotropic reaction- diffusion systems and the algorithmic framework of the soft- ware Redi (Reaction-Diffusion simulator) that implements this model. As illustrative application, we show the ability of Redi to reproduce the observed dynamics of the bicoid protein gradient in the Drosophila Melanogaster embryo. © 2010 IEEE.

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Lecca, P., Dematté, L., Ihekwaba, A. E. C., & Priami, C. (2010). Redi: A simulator of stochastic biochemical reaction-diffusion systems. In Proceedings - 2nd International Conference on Advances in System Simulation, SIMUL 2010 (pp. 82–87). https://doi.org/10.1109/SIMUL.2010.14

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