Analysis of the complete genome sequence of Cucumber mosaic virus strain K.

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Abstract

The complete genome sequence of Cucumber mosaic virus strain K was determined by deep RNA sequencing. The tripartite genome consists of a 3,382-nucleotide (nt) RNA1, a 3,050-nt RNA2, and a 2,218-nt RNA3 segment. Phylogenetic analysis placed RNA1 and RNA2 in subgroup IB. However, RNA3 grouped with subgroup IA isolates, indicating a likely recombination event.

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Moyle, R., Pretorius, L. S., Shuey, L. S., Nowak, E., & Schenka, P. M. (2018). Analysis of the complete genome sequence of Cucumber mosaic virus strain K. Genome Announcements, 6(7). https://doi.org/10.1128/genomeA.00053-18

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