HAT: Hypergraph analysis toolbox

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Abstract

Recent advances in biological technologies, such as multi-way chromosome conformation capture (3C), require development of methods for analysis of multi-way interactions. Hypergraphs are mathematically tractable objects that can be utilized to precisely represent and analyze multi-way interactions. Here we present the Hypergraph Analysis Toolbox (HAT), a software package for visualization and analysis of multi-way interactions in complex systems.

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Pickard, J., Chen, C., Salman, R., Stansbury, C., Kim, S., Surana, A., … Rajapakse, I. (2023). HAT: Hypergraph analysis toolbox. PLoS Computational Biology, 19(6 June). https://doi.org/10.1371/journal.pcbi.1011190

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