Proteomics to go: Proteomatic enables the user-friendly creation of versatile MS/MS data evaluation workflows

Abstract

Summary: We present Proteomatic, an operating system independent and user-friendly platform that enables the construction and execution of MS/MS data evaluation pipelines using free and commercial software. Required external programs such as for peptide identification are downloaded automatically in the case of free software. Due to a strict separation of functionality and presentation, and support for multiple scripting languages, new processing steps can be added easily. © The Author 2011. Published by Oxford University Press. All rights reserved.