Ordino: A visual cancer analysis tool for ranking and exploring genes, cell lines and tissue samples

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Abstract

Ordino is a web-based analysis tool for cancer genomics that allows users to flexibly rank, filter and explore genes, cell lines and tissue samples based on pre-loaded data, including The Cancer Genome Atlas, the Cancer Cell Line Encyclopedia and manually uploaded information. Interactive tabular data visualization that facilitates the user-driven prioritization process forms a core component of Ordino. Detail views of selected items complement the exploration. Findings can be stored, shared and reproduced via the integrated session management.

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Streit, M., Gratzl, S., Stitz, H., Wernitznig, A., Zichner, T., & Haslinger, C. (2019). Ordino: A visual cancer analysis tool for ranking and exploring genes, cell lines and tissue samples. Bioinformatics, 35(17), 3140–3142. https://doi.org/10.1093/bioinformatics/btz009

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