Abstract
The NARWHAL software pipeline has been developed to automate the primary analysis of Illumina sequencing data. This pipeline combines a new and flexible de-multiplexing tool with open-source aligners and automated quality assessment. The entire pipeline can be run using only one simple sample-sheet for diverse sequencing applications. NARWHAL creates a sample-oriented data structure and outperforms existing tools in speed. © The Author 2011. Published by Oxford University Press. All rights reserved.
Cite
CITATION STYLE
Brouwer, R. W. W., van den hout, M. C. G. N., Grosveld, F. G., & van ijcken, W. F. J. (2012). NARWHAL, a primary analysis pipeline for NGS data. Bioinformatics, 28(2), 284–285. https://doi.org/10.1093/bioinformatics/btr613
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